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Mustafa Hani Khammash: Katalogdaten im Herbstsemester 2018

NameHerr Prof. Dr. Mustafa Hani Khammash
LehrgebietRegelungstheorie und Systembiologie
Adresse
Regelungstheorie u. Systembiologie
ETH Zürich, BSA M 700
Mattenstr. 26
4058 Basel
SWITZERLAND
Auszeichnung: Die Goldene Eule
Telefon+41 61 387 33 56
E-Mailmustafa.khammash@bsse.ethz.ch
URLhttp://www.bsse.ethz.ch/ctsb
DepartementBiosysteme
BeziehungOrdentlicher Professor

NummerTitelECTSUmfangDozierende
227-0920-00LSeminar in Systems and Control0 KP1SF. Dörfler, R. D'Andrea, E. Frazzoli, M. H. Khammash, J. Lygeros, R. Smith
KurzbeschreibungCurrent topics in Systems and Control presented mostly by external speakers from academia and industry
Lernzielsee above
636-0102-00LAdvanced Bioengineering4 KP3SS. Panke, Y. Benenson, P. S. Dittrich, M. Fussenegger, A. Hierlemann, M. H. Khammash, D. J. Müller, R. Paro, R. Platt, T. Schroeder
KurzbeschreibungThis course provides an overview of modern concepts of bioengineering across different levels of complexity, from single molecules to systems, microscaled reactors to production environments, and across different fields of applications
LernzielStudents will be able to recognize major developments in bioengineering across different organisms and levels of complexity and be able to relate it to major technological and conceptual advances in the underlying sciences.
InhaltMolecular and cellular engineering; Synthetic biology: Engineering strategies in biology; from single molecules to systems; downscaling bioengineering; Bioengineering in chemistry, pharmaceutical sciences, and diagnostics, personalized medicine.
SkriptHandouts during class
LiteraturWill be announced during the course
636-0118-00LIntroduction to Dynamical Systems with Applications to Biology4 KP3GM. H. Khammash, A. Gupta
KurzbeschreibungMany physical systems are dynamic and are characterized by internal variables that change with time. Describing the quantitative and qualitative features of this change is the topic of dynamical systems theory. Dynamical systems arise naturally in virtually all scientific disciplines including physics, biology, chemistry and engineering. This course is a broad introduction to the topic dynamical s
LernzielThe goal of this course is to introduce the student to dynamical systems and to develop a solid understanding of their fundamental properties. The theory will be developed systematically, focusing on analytical methods for low dimensional systems, geometric intuition, and application examples from biology. Computer simulations using matlab will be used to demonstrate various concepts
InhaltA dynamical view of the world; the importance of nonlinearity; solutions of differential equations; solving equations on the computer; the phase plane; fixed points and stability; linear stability analysis; classifications of linear systems; Liapunov functions and nonlinear stability; cycles and oscillations; bifurcations and bifurcation diagrams. Many biological examples will be used through the course to demonstrate the concepts
SkriptWill be provided as needed.
LiteraturStrogatz, S. H. (2018). Nonlinear dynamics and chaos: with applications to physics, biology, chemistry, and engineering. CRC Press.

Segel, L. A., & Edelstein-Keshet, L. (2013). A Primer in Mathematical Models in Biology (Vol. 129). SIAM.
Voraussetzungen / BesonderesPrerequisites: Calculus; a first course in differential equations; basic linear algebra (eigenvalues and eigenvectors). Matlab programming.
636-0301-00LCurrent Topics in Biosystems Science and Engineering
For doctoral students only.
Master's students cannot receive credits for the seminar.
2 KP1SR. Platt, N. Beerenwinkel, Y. Benenson, K. M. Borgwardt, P. S. Dittrich, M. Fussenegger, A. Hierlemann, D. Iber, M. H. Khammash, D. J. Müller, S. Panke, R. Paro, S. Reddy, T. Schroeder, T. Stadler, J. Stelling
KurzbeschreibungThis seminar will feature invited lectures about recent advances and developments in systems biology, including topics from biology, bioengineering, and computational biology.
LernzielTo provide an overview of current systems biology research.
InhaltThe final list of topics will be available at https://www.bsse.ethz.ch/news-and-events/seminar-series.html