Martin Herbert Schroth: Catalogue data in Spring Semester 2016
|Name||Prof. Dr. Martin Herbert Schroth|
I. f. Biogeochemie/Schadstoffdyn.
ETH Zürich, CHN G 35.2
|Telephone||+41 44 633 60 39|
|Department||Environmental Systems Science|
|701-0230-00L||Microbial Ecology |
Number of participants limited to 9.
|2 credits||3P||M. H. Schroth, J. Zeyer|
|Abstract||The field course "Microbial ecology" enables students to learn a number of state of the art methods which are commonly used to study microbial structures and functions in natural habitats. The course includes lectures, field trips, training in the laboratory and a presentation of the data. The focus will be on habitats such as microbial mats, alpine wetlands and stratified lakes.|
|Objective||Characterization of microbial structures and functions in natural habitats by using state of the art molecular, chemical and physical tools.|
|Content||The field course is taught in an alpine research station in Val Piora (TI). The methods to be addressed include flux measurements, microsensors , determination of depth profiles, microbiological techniques, etc. The students will also learn to take samples in aquatic and terrestrial systems.|
|Lecture notes||Handouts will be available in the course.|
|Literature||M.T. Madigan, J.M. Martinko, P.V. Dunlap & J. Parker|
"Brock Biology of Microorganisms"
|Prerequisites / Notice||Course taught together with University of Basel|
|701-0420-01L||Practical Training in Biogeochemistry||7 credits||14P||B. Wehrli, T. Kalvelage, P. U. Lehmann Grunder, D. Radny, M. H. Schroth, A. Voegelin|
|Abstract||The course offers practical training biogeochemical analyses. The first half of the semester is focused on terrestrial systems and all students learn how to analyse soil systems with physical, chemical and microbiological methods. Later, they form small groups and work on small research projects situated around an river-groundwater system.|
|Objective||The students learn to apply physical, chemical and microbiological analysis tools in the laboratroy and the field. They use their theoretical knowledge to interpret their own data, and to critically assess and document them.|
|Lecture notes||Descriptions of the methodologies will be provided.|
|701-1302-00L||Term Paper 2: Seminar|
Prerequisite: Term Paper 1: Writing (701-1303-00L).
|2 credits||1S||K. McNeill, M. Ackermann, N. Gruber, J. Hering, R. Kretzschmar, M. Lever, M. H. Schroth, B. Wehrli, L. Winkel|
|Abstract||This class is the 2nd part of a series and participation is conditional on the successful completion of the Term paper Writing class (701-1303-00L). The results from the term paper written during the winter term are presented to the other students and advisors and discussed.|
|Objective||The goal of the term paper Seminars is to train the student's ability to communicate the results to a wider audience and the ability to respond to questions and comments.|
|Content||Each student presents the results of the term paper to the other students and advisors and responds to questions and comments from the audience.|
|Prerequisites / Notice||The term papers will be made publically available after each student had the opportunity to make revisions.|
There is no final exam. Grade is assigned based on the quality of the presentation and ensuing discussion.
|701-1303-00L||Term Paper 1: Writing||5 credits||6A||M. H. Schroth, M. Ackermann, N. Gruber, J. Hering, R. Kretzschmar, M. Lever, K. McNeill, B. Wehrli, L. Winkel|
|Abstract||The ability to critically evaluate original (scientific) literature and to summarize the information in|
a succinct manner is an important skill for any student. This course aims to practice this ability, requiring each student to write a term paper on a topic of relevance for research in the areas of biogeochemistry and pollutant dynamics.
|Objective||The goal of the term paper is to train the student's ability to|
critically evaluate a well-defined set of research subjects, and to
summarize the findings concisely in a paper of scientific quality. The
paper will be evaluated based on its ability to communicate an
understanding of a topic, and to identify key outstanding questions.
Results from this term paper will be presented to the fellow students and
involved faculty in the following semester (Term paper seminars)
|Content||Each student is expected to write a paper with a length of approximately 15 pages. The students can choose from a list of topics prepared by the supervisors, but the final topic will be determined based on a balance of choice and availability. The students will be guided and advised by their advisors throughout the term. The paper itself should contain the following elements: Motivation and context of the given topic (25%), Concise presentation of the state of the science (50%), Identification of open questions and perhaps outline of opportunities for research (25). |
In addition, the accurate use of citations, attribution of ideas, and the judicious use of figures, tables, equations and references are critical components of a successful paper. Specialized knowledge is not expected, nor required, neither is new research.
|Lecture notes||Guidelines and supplementary material will be handed out at the beginning of the class.|
|Literature||Will be identified based on the chosen topic.|
|Prerequisites / Notice||Each term paper will be reviewed by one fellow student and one faculty. The submission of a written review is a condition for obtaining the credit points. |
There is no final exam. Grade is assigned based on the quality of the term paper and the submission of another student's review.
|701-1310-00L||Environmental Microbiology||3 credits||2V||M. H. Schroth, M. Lever|
|Abstract||Microorganisms catalyze a large number of reactions that are of great importance to terrestrial and aquatic environments. To improve our understanding of the dynamics of a specific environment, it is important to gain a better understanding of microbial structures and their functions under varying environmental conditions.|
|Objective||Students will learn basic concepts in microbial ecology. Qualitative and quantitative concepts will be presented to assess microbial communities and associated processes in terrestrial and aquatic environments. Microbial diversity in such ecosystems will be illustrated in discussions of selected habitats.|
|Content||Lectures will cover general concepts of environmental microbiology including (i) quantification of microbial processes, (ii) energy fluxes in microbial ecosystems, (iii) application of state-of-the-art microbiological and molecular tools, and (iv) use of isotope methods for identification of microbial structures and functions. |
Topics to illustrate the microbial diversity of terrestrial and aquatic ecosystems will include (i) interactions between microbes and mineral/metallic solid phases, (ii) microbial carbon and nutrient cycling, (iii) microbial processes involved in the turnover of greenhouse gases, (iv) biofilms and microbial mats, (v) bioremediation, (vi) microorganisms in extreme habitats, and (vii) microbial evolution and astrobiology.
|Lecture notes||available at time of lecture - will be distributed electronically as pdf's|
|Literature||Brock Biology of Microorganisms, Madigan M. et al., Pearson, 14th ed., 2015|